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LOC128168336 laminin subunit alpha-2-like [ Magallana angulata ]

Gene ID: 128168336, updated on 24-Jul-2024

Summary

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Gene symbol
LOC128168336
Gene description
laminin subunit alpha-2-like
See related
EnsemblRapid:LOC128168336
Gene type
protein coding
RefSeq status
MODEL
Organism
Magallana angulata
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia; Autobranchia; Pteriomorphia; Ostreida; Ostreoidea; Ostreidae; Magallana
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Genomic context

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See LOC128168336 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
75
Annotation release Status Assembly Chr Location
RS_2022_12 current ASM2561291v2 (GCF_025612915.1) 10 NC_069120.1 (10068751..10132093, complement)

Chromosome 10 - NC_069120.1Genomic Context describing neighboring genes Neighboring gene protein-L-isoaspartate O-methyltransferase domain-containing protein 1-like Neighboring gene myelin transcription factor 1-like Neighboring gene transfer RNA phenylalanine (anticodon AAA) Neighboring gene cadherin-23-like Neighboring gene cadherin-87A-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_069120.1 Chromosome 10 Reference ASM2561291v2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables extracellular matrix structural constituent IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in basement membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
laminin subunit alpha-2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_025612915.1-RS_2022_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2561291v2

Genomic

  1. NC_069120.1 Reference ASM2561291v2

    Range
    10068751..10132093 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_052834574.1 → XP_052690534.1  laminin subunit alpha-2-like isoform X6

    Related
    XP_052690534.1, XM_052834574.1

  2. XM_052834570.1 → XP_052690530.1  laminin subunit alpha-2-like isoform X2

    Related
    XP_052690530.1, XM_052834570.1

  3. XM_052834571.1 → XP_052690531.1  laminin subunit alpha-2-like isoform X3

    Related
    XP_052690531.1, XM_052834571.1

  4. XM_052834569.1 → XP_052690529.1  laminin subunit alpha-2-like isoform X1

    Related
    XP_052690529.1, XM_052834569.1

  5. XM_052834573.1 → XP_052690533.1  laminin subunit alpha-2-like isoform X5

    Related
    XP_052690533.1, XM_052834573.1

  6. XM_052834572.1 → XP_052690532.1  laminin subunit alpha-2-like isoform X4

    Related
    XP_052690532.1, XM_052834572.1
Nucleotide Protein
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