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LOC128155468 E3 ubiquitin-protein ligase CBL-B-like [ Magallana angulata ]

Gene ID: 128155468, updated on 24-Jul-2024

Summary

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Gene symbol
LOC128155468
Gene description
E3 ubiquitin-protein ligase CBL-B-like
See related
EnsemblRapid:LOC128155468
Gene type
protein coding
RefSeq status
MODEL
Organism
Magallana angulata
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia; Autobranchia; Pteriomorphia; Ostreida; Ostreoidea; Ostreidae; Magallana
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Genomic context

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See LOC128155468 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2022_12 current ASM2561291v2 (GCF_025612915.1) 7 NC_069117.1 (14704690..14738521, complement)

Chromosome 7 - NC_069117.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC128155472 Neighboring gene protein AAR2 homolog Neighboring gene TBC1 domain family member 23-like Neighboring gene uncharacterized LOC128155473 Neighboring gene uncharacterized LOC128155232

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_069117.1 Chromosome 7 Reference ASM2561291v2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables SH3 domain binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphotyrosine residue binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables receptor tyrosine kinase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell surface receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of epidermal growth factor-activated receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane raft IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase CBL-B-like; E3 ubiquitin-protein ligase CBL-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_025612915.1-RS_2022_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2561291v2

Genomic

  1. NC_069117.1 Reference ASM2561291v2

    Range
    14704690..14738521 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_052817182.1 → XP_052673142.1  E3 ubiquitin-protein ligase CBL-B-like isoform X8

    Related
    XP_052673142.1, XM_052817182.1

  2. XM_052817178.1 → XP_052673138.1  E3 ubiquitin-protein ligase CBL-like isoform X4

    Related
    XP_052673138.1, XM_052817178.1

  3. XM_052817175.1 → XP_052673135.1  E3 ubiquitin-protein ligase CBL-like isoform X1

    Related
    XP_052673135.1, XM_052817175.1

  4. XM_052817177.1 → XP_052673137.1  E3 ubiquitin-protein ligase CBL-like isoform X3

    Related
    XP_052673137.1, XM_052817177.1

  5. XM_052817176.1 → XP_052673136.1  E3 ubiquitin-protein ligase CBL-like isoform X2

    Related
    XP_052673136.1, XM_052817176.1

  6. XM_052817183.1 → XP_052673143.1  E3 ubiquitin-protein ligase CBL-B-like isoform X9

    Related
    XP_052673143.1, XM_052817183.1

  7. XM_052817180.1 → XP_052673140.1  E3 ubiquitin-protein ligase CBL-B-like isoform X6

    Related
    XP_052673140.1, XM_052817180.1

  8. XM_052817184.1 → XP_052673144.1  E3 ubiquitin-protein ligase CBL-B-like isoform X10

    Related
    XP_052673144.1, XM_052817184.1

  9. XM_052817181.1 → XP_052673141.1  E3 ubiquitin-protein ligase CBL-like isoform X7

    Related
    XP_052673141.1, XM_052817181.1

  10. XM_052817179.1 → XP_052673139.1  E3 ubiquitin-protein ligase CBL-like isoform X5

    Related
    XP_052673139.1, XM_052817179.1
Nucleotide Protein
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