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LOC128092253 umcharacterized LOC128092253 [ Homo sapiens (human) ]

Gene ID: 128092253, updated on 26-Oct-2023

Summary

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Gene symbol
LOC128092253
Gene description
umcharacterized LOC128092253
See related
Ensembl:ENSG00000288529
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
6q23.2
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (133953304..133980088)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (135141328..135168099)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene TCF21 antisense RNA inducing promoter demethylation Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17554 Neighboring gene long intergenic non-protein coding RNA 1312 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr6:134175312-134176050 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr6:134209799-134210712 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:134211964-134212728 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:134213614-134214222 Neighboring gene transcription factor 21 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17555 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_90026 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_90028 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25081 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_90037 Neighboring gene epithelial splicing regulatory protein 1 pseudogene Neighboring gene TATA-box binding protein like 1 Neighboring gene solute carrier family 2 member 12 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr6:134381498-134382162 Neighboring gene H3K27ac hESC enhancer GRCh37_chr6:134382163-134382827 Neighboring gene uncharacterized LOC124901404 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17556 Neighboring gene high mobility group AT-hook 1 pseudogene 7

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

General protein information

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Preferred Names
umcharacterized LOC128092253

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001414965.1 → NP_001401894.1  umcharacterized LOC128092253

    Status: VALIDATED

    Source sequence(s)
    AL035699
    UniProtKB/TrEMBL
    A0A669KAW2
    Related
    ENSP00000501013.1, ENST00000674115.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    133953304..133980088
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    135141328..135168099
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases