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LOC128091591 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1-like [ Tympanuchus pallidicinctus (lesser prairie-chicken) ]

Gene ID: 128091591, updated on 23-Nov-2023

Summary

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Gene symbol
LOC128091591
Gene description
galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Tympanuchus pallidicinctus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Tetraoninae; Tympanuchus
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Genomic context

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See LOC128091591 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_02 current pur_lepc_1.0 (GCF_026119805.1) Unplaced Scaffold NW_026294619.1 (2129132..2156174, complement)

NW_026294619.1Genomic Context describing neighboring genes Neighboring gene beta-1,4-galactosyltransferase 4 Neighboring gene beta-1,4-galactosyltransferase 3 Neighboring gene Rho GTPase activating protein 31 Neighboring gene uroplakin 1B

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026294619 Unplaced Scaffold Reference pur_lepc_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chondroitin sulfate proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_026119805.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference pur_lepc_1.0

Genomic

  1. NW_026294619.1 Reference pur_lepc_1.0

    Range
    2129132..2156174 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_052704932.1 → XP_052560892.1  galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1-like

  2. XM_052704924.1 → XP_052560884.1  galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1-like

  3. XM_052704939.1 → XP_052560899.1  galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1-like

  4. XM_052704938.1 → XP_052560898.1  galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1-like

RNA

  1. XR_008211491.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases