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PIGV phosphatidylinositol glycan anchor biosynthesis class V [ Tympanuchus pallidicinctus (lesser prairie-chicken) ]

Gene ID: 128088476, updated on 25-Mar-2024

Summary

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Gene symbol
PIGV
Gene description
phosphatidylinositol glycan anchor biosynthesis class V
Gene type
protein coding
RefSeq status
MODEL
Organism
Tympanuchus pallidicinctus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Tetraoninae; Tympanuchus
Orthologs
human mouse all
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Genomic context

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See PIGV in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_02 current pur_lepc_1.0 (GCF_026119805.1) Unplaced Scaffold NW_026294753.1 (35316..53425, complement)

NW_026294753.1Genomic Context describing neighboring genes Neighboring gene biogenesis of lysosome-related organelles complex 1 subunit 3-like Neighboring gene uncharacterized LOC128088483 Neighboring gene uncharacterized LOC128088493 Neighboring gene AT-rich interaction domain 1A Neighboring gene uncharacterized LOC128088492

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026294753 Unplaced Scaffold Reference pur_lepc_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,6-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glycolipid mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of mannosyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GPI mannosyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_026119805.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference pur_lepc_1.0

Genomic

  1. NW_026294753.1 Reference pur_lepc_1.0

    Range
    35316..53425 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_052699073.1 → XP_052555033.1  GPI mannosyltransferase 2 isoform X2

  2. XM_052699070.1 → XP_052555030.1  GPI mannosyltransferase 2 isoform X1

  3. XM_052699072.1 → XP_052555032.1  GPI mannosyltransferase 2 isoform X1

  4. XM_052699071.1 → XP_052555031.1  GPI mannosyltransferase 2 isoform X1

  5. XM_052699069.1 → XP_052555029.1  GPI mannosyltransferase 2 isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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