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GPLD1 glycosylphosphatidylinositol specific phospholipase D1 [ Tympanuchus pallidicinctus (lesser prairie-chicken) ]

Gene ID: 128087940, updated on 25-Mar-2024

Summary

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Gene symbol
GPLD1
Gene description
glycosylphosphatidylinositol specific phospholipase D1
Gene type
protein coding
RefSeq status
MODEL
Organism
Tympanuchus pallidicinctus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Tetraoninae; Tympanuchus
Orthologs
human mouse all
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Genomic context

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See GPLD1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
25
Annotation release Status Assembly Chr Location
RS_2023_02 current pur_lepc_1.0 (GCF_026119805.1) Unplaced Scaffold NW_026294749.1 (11700552..11721179, complement)

NW_026294749.1Genomic Context describing neighboring genes Neighboring gene doublecortin domain containing 2 Neighboring gene ras-related protein Rab-35-like Neighboring gene magnesium transporter MRS2 Neighboring gene aldehyde dehydrogenase 5 family member A1 Neighboring gene KIAA0319 ortholog Neighboring gene uncharacterized LOC128087948

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026294749 Unplaced Scaffold Reference pur_lepc_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosylphosphatidylinositol phospholipase D activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor release IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylinositol-glycan-specific phospholipase D

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_026119805.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference pur_lepc_1.0

Genomic

  1. NW_026294749.1 Reference pur_lepc_1.0

    Range
    11700552..11721179 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_052697982.1 → XP_052553942.1  phosphatidylinositol-glycan-specific phospholipase D isoform X2

  2. XM_052697980.1 → XP_052553940.1  phosphatidylinositol-glycan-specific phospholipase D isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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