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KDSR 3-ketodihydrosphingosine reductase [ Tympanuchus pallidicinctus (lesser prairie-chicken) ]

Gene ID: 128087754, updated on 25-Mar-2024

Summary

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Gene symbol
KDSR
Gene description
3-ketodihydrosphingosine reductase
Gene type
protein coding
RefSeq status
MODEL
Organism
Tympanuchus pallidicinctus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Tetraoninae; Tympanuchus
Orthologs
human mouse all
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Genomic context

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See KDSR in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_02 current pur_lepc_1.0 (GCF_026119805.1) Unplaced Scaffold NW_026294749.1 (2022120..2045010, complement)

NW_026294749.1Genomic Context describing neighboring genes Neighboring gene MARVEL domain-containing protein 3-like Neighboring gene BCL2 apoptosis regulator Neighboring gene uncharacterized LOC128087761 Neighboring gene translation initiation factor IF-2-like Neighboring gene vacuolar protein sorting 4 homolog B

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026294749 Unplaced Scaffold Reference pur_lepc_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3-dehydrosphinganine reductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in 3-keto-sphinganine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sphingolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
3-ketodihydrosphingosine reductase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_026119805.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference pur_lepc_1.0

Genomic

  1. NW_026294749.1 Reference pur_lepc_1.0

    Range
    2022120..2045010 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_052697632.1 → XP_052553592.1  3-ketodihydrosphingosine reductase isoform X2

  2. XM_052697631.1 → XP_052553591.1  3-ketodihydrosphingosine reductase isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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