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PLA2G4B phospholipase A2 group IVB [ Tympanuchus pallidicinctus (lesser prairie-chicken) ]

Gene ID: 128087044, updated on 25-Mar-2024

Summary

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Gene symbol
PLA2G4B
Gene description
phospholipase A2 group IVB
Gene type
protein coding
RefSeq status
MODEL
Organism
Tympanuchus pallidicinctus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Tetraoninae; Tympanuchus
Orthologs
human mouse all
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Genomic context

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See PLA2G4B in Genome Data Viewer
Location:
chromosome: Un
Exon count:
28
Annotation release Status Assembly Chr Location
RS_2023_02 current pur_lepc_1.0 (GCF_026119805.1) Unplaced Scaffold NW_026294747.1 (24429008..24476216)

NW_026294747.1Genomic Context describing neighboring genes Neighboring gene mitogen-activated protein kinase binding protein 1 Neighboring gene acyl-coenzyme A thioesterase 1-like Neighboring gene jumonji domain containing 7 Neighboring gene spectrin beta, non-erythrocytic 5 Neighboring gene EH domain containing 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026294747 Unplaced Scaffold Reference pur_lepc_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium-dependent phospholipase A2 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium-dependent phospholipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycerophospholipid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cytosolic phospholipase A2 beta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_026119805.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference pur_lepc_1.0

Genomic

  1. NW_026294747.1 Reference pur_lepc_1.0

    Range
    24429008..24476216
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_052696241.1 → XP_052552201.1  cytosolic phospholipase A2 beta isoform X1

  2. XM_052696252.1 → XP_052552212.1  cytosolic phospholipase A2 beta isoform X3

  3. XM_052696249.1 → XP_052552209.1  cytosolic phospholipase A2 beta isoform X2

  4. XM_052696253.1 → XP_052552213.1  cytosolic phospholipase A2 beta isoform X4

  5. XM_052696243.1 → XP_052552203.1  cytosolic phospholipase A2 beta isoform X1

  6. XM_052696242.1 → XP_052552202.1  cytosolic phospholipase A2 beta isoform X1

  7. XM_052696245.1 → XP_052552205.1  cytosolic phospholipase A2 beta isoform X1

  8. XM_052696247.1 → XP_052552207.1  cytosolic phospholipase A2 beta isoform X1

  9. XM_052696244.1 → XP_052552204.1  cytosolic phospholipase A2 beta isoform X1

  10. XM_052696246.1 → XP_052552206.1  cytosolic phospholipase A2 beta isoform X1

  11. XM_052696248.1 → XP_052552208.1  cytosolic phospholipase A2 beta isoform X1

  12. XM_052696251.1 → XP_052552211.1  cytosolic phospholipase A2 beta isoform X2

  13. XM_052696254.1 → XP_052552214.1  cytosolic phospholipase A2 beta isoform X4

Nucleotide Protein
Heading Accession and Version

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