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INPP5D inositol polyphosphate-5-phosphatase D [ Tympanuchus pallidicinctus (lesser prairie-chicken) ]

Gene ID: 128082802, updated on 25-Mar-2024

Summary

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Gene symbol
INPP5D
Gene description
inositol polyphosphate-5-phosphatase D
Gene type
protein coding
RefSeq status
MODEL
Organism
Tympanuchus pallidicinctus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Tetraoninae; Tympanuchus
Orthologs
human mouse all
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Genomic context

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See INPP5D in Genome Data Viewer
Location:
chromosome: Un
Exon count:
28
Annotation release Status Assembly Chr Location
RS_2023_02 current pur_lepc_1.0 (GCF_026119805.1) Unplaced Scaffold NW_026294739.1 (2240158..2285287, complement)

NW_026294739.1Genomic Context describing neighboring genes Neighboring gene small Cajal body-specific RNA 6 Neighboring gene autophagy related 16 like 1 Neighboring gene small Cajal body-specific RNA 6 Neighboring gene neuraminidase 2 Neighboring gene neuronal guanine nucleotide exchange factor Neighboring gene secondary ossification center associated regulator of chondrocyte maturation

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026294739 Unplaced Scaffold Reference pur_lepc_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylinositol dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_026119805.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference pur_lepc_1.0

Genomic

  1. NW_026294739.1 Reference pur_lepc_1.0

    Range
    2240158..2285287 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_052687387.1 → XP_052543347.1  phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1 isoform X2

  2. XM_052687386.1 → XP_052543346.1  phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1 isoform X1

Nucleotide Protein
Heading Accession and Version

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