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B3GNT5 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 [ Tympanuchus pallidicinctus (lesser prairie-chicken) ]

Gene ID: 128081849, updated on 2-May-2024

Summary

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Gene symbol
B3GNT5
Gene description
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5
Gene type
protein coding
RefSeq status
MODEL
Organism
Tympanuchus pallidicinctus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Tetraoninae; Tympanuchus
Orthologs
human mouse all
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Genomic context

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See B3GNT5 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_02 current pur_lepc_1.0 (GCF_026119805.1) Unplaced Scaffold NW_026294739.1 (15581258..15599774, complement)

NW_026294739.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA63 Neighboring gene eukaryotic translation initiation factor 4A2 Neighboring gene replication factor C subunit 4 Neighboring gene MCF.2 cell line derived transforming sequence-like 2 Neighboring gene lysosomal associated membrane protein 3 Neighboring gene methylcrotonyl-CoA carboxylase subunit 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026294739 Unplaced Scaffold Reference pur_lepc_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in brain development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_026119805.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference pur_lepc_1.0

Genomic

  1. NW_026294739.1 Reference pur_lepc_1.0

    Range
    15581258..15599774 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_052685551.1 → XP_052541511.1  lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase

  2. XM_052685547.1 → XP_052541507.1  lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase

  3. XM_052685548.1 → XP_052541508.1  lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase

  4. XM_052685545.1 → XP_052541505.1  lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase

  5. XM_052685549.1 → XP_052541509.1  lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase

  6. XM_052685546.1 → XP_052541506.1  lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase

  7. XM_052685550.1 → XP_052541510.1  lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase

  8. XM_052685552.1 → XP_052541512.1  lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase

Nucleotide Protein
Heading Accession and Version

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