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NDST1 N-deacetylase and N-sulfotransferase 1 [ Tympanuchus pallidicinctus (lesser prairie-chicken) ]

Gene ID: 128081485, updated on 25-Mar-2024

Summary

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Gene symbol
NDST1
Gene description
N-deacetylase and N-sulfotransferase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Tympanuchus pallidicinctus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Tetraoninae; Tympanuchus
Orthologs
human mouse all
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Genomic context

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See NDST1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2023_02 current pur_lepc_1.0 (GCF_026119805.1) Unplaced Scaffold NW_026294733.1 (499618..518957)

NW_026294733.1Genomic Context describing neighboring genes Neighboring gene CD74 molecule Neighboring gene ribosomal protein S14 Neighboring gene synaptopodin Neighboring gene myozenin 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026294733 Unplaced Scaffold Reference pur_lepc_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine N-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables deacetylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_026119805.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference pur_lepc_1.0

Genomic

  1. NW_026294733.1 Reference pur_lepc_1.0

    Range
    499618..518957
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_052684758.1 → XP_052540718.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1

  2. XM_052684749.1 → XP_052540709.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1

  3. XM_052684756.1 → XP_052540716.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1

  4. XM_052684751.1 → XP_052540711.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1

  5. XM_052684752.1 → XP_052540712.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1

  6. XM_052684755.1 → XP_052540715.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1

  7. XM_052684750.1 → XP_052540710.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1

  8. XM_052684753.1 → XP_052540713.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1

  9. XM_052684757.1 → XP_052540717.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1

Nucleotide Protein
Heading Accession and Version

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