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RPN2 ribophorin II [ Tympanuchus pallidicinctus (lesser prairie-chicken) ]

Gene ID: 128080936, updated on 25-Mar-2024

Summary

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Gene symbol
RPN2
Gene description
ribophorin II
Gene type
protein coding
RefSeq status
MODEL
Organism
Tympanuchus pallidicinctus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Tetraoninae; Tympanuchus
Orthologs
human mouse all
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Genomic context

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See RPN2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2023_02 current pur_lepc_1.0 (GCF_026119805.1) Unplaced Scaffold NW_026294722.1 (12444384..12465454)

NW_026294722.1Genomic Context describing neighboring genes Neighboring gene phospholipase C gamma 1 Neighboring gene zinc fingers and homeoboxes 3 Neighboring gene elastin microfibril interfacer 3 Neighboring gene uncharacterized LOC128081182 Neighboring gene dynein light chain roadblock-type 1-like Neighboring gene dynein light chain roadblock-type 1-like Neighboring gene growth hormone releasing hormone

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026294722 Unplaced Scaffold Reference pur_lepc_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of oligosaccharyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_026119805.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference pur_lepc_1.0

Genomic

  1. NW_026294722.1 Reference pur_lepc_1.0

    Range
    12444384..12465454
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_052683752.1 → XP_052539712.1  dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 isoform X1

  2. XM_052683753.1 → XP_052539713.1  dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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