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TRAF2 TNF receptor associated factor 2 [ Tympanuchus pallidicinctus (lesser prairie-chicken) ]

Gene ID: 128079775, updated on 25-Mar-2024

Summary

Gene symbol
TRAF2
Gene description
TNF receptor associated factor 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Tympanuchus pallidicinctus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Tetraoninae; Tympanuchus
Orthologs
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Genomic context

See TRAF2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_02 current pur_lepc_1.0 (GCF_026119805.1) Unplaced Scaffold NW_026294710.1 (1177062..1195805)

NW_026294710.1Genomic Context describing neighboring genes Neighboring gene MAM domain containing 4 Neighboring gene endothelial differentiation related factor 1 Neighboring gene F-box and WD repeat domain containing 5 Neighboring gene complement C8 gamma chain

Genomic regions, transcripts, and products

Genomic Sequence:
NW_026294710 Unplaced Scaffold Reference pur_lepc_1.0

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables tumor necrosis factor receptor binding IEA
Inferred from Electronic Annotation
more info
PubMed 
enables ubiquitin protein ligase binding IEA
Inferred from Electronic Annotation
more info
PubMed 
enables ubiquitin-protein transferase activity IEA
Inferred from Electronic Annotation
more info
PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in cytoplasmic side of plasma membrane IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
PubMed 
part_of plasma membrane signaling receptor complex IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
TNF receptor-associated factor 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_026119805.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference pur_lepc_1.0

Genomic

  1. NW_026294710.1 Reference pur_lepc_1.0

    Range
    1177062..1195805
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_052681313.1XP_052537273.1  TNF receptor-associated factor 2 isoform X1

  2. XM_052681315.1XP_052537275.1  TNF receptor-associated factor 2 isoform X3

  3. XM_052681314.1XP_052537274.1  TNF receptor-associated factor 2 isoform X2