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OTOA otoancorin [ Tympanuchus pallidicinctus (lesser prairie-chicken) ]

Gene ID: 128079370, updated on 25-Mar-2024

Summary

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Gene symbol
OTOA
Gene description
otoancorin
Gene type
protein coding
RefSeq status
MODEL
Organism
Tympanuchus pallidicinctus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Tetraoninae; Tympanuchus
Orthologs
human mouse all
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Genomic context

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See OTOA in Genome Data Viewer
Location:
chromosome: Un
Exon count:
29
Annotation release Status Assembly Chr Location
RS_2023_02 current pur_lepc_1.0 (GCF_026119805.1) Unplaced Scaffold NW_026294699.1 (6452264..6488335, complement)

NW_026294699.1Genomic Context describing neighboring genes Neighboring gene diacylglycerol lipase beta Neighboring gene KDEL endoplasmic reticulum protein retention receptor 2 Neighboring gene methyltransferase 9, His-X-His N1(pi)-histidine Neighboring gene immunoglobulin superfamily member 6 Neighboring gene transmembrane protein 180-like Neighboring gene cerebellar degeneration related protein 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026294699 Unplaced Scaffold Reference pur_lepc_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cell-matrix adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
otoancorin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_026119805.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference pur_lepc_1.0

Genomic

  1. NW_026294699.1 Reference pur_lepc_1.0

    Range
    6452264..6488335 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_052680498.1 → XP_052536458.1  otoancorin isoform X2

  2. XM_052680497.1 → XP_052536457.1  otoancorin isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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