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CHST13 carbohydrate sulfotransferase 13 [ Tympanuchus pallidicinctus (lesser prairie-chicken) ]

Gene ID: 128078576, updated on 25-Mar-2024

Summary

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Gene symbol
CHST13
Gene description
carbohydrate sulfotransferase 13
Gene type
protein coding
RefSeq status
MODEL
Organism
Tympanuchus pallidicinctus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Tetraoninae; Tympanuchus
Orthologs
human mouse all
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Genomic context

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See CHST13 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_02 current pur_lepc_1.0 (GCF_026119805.1) Unplaced Scaffold NW_026294690.1 (10159448..10210955)

NW_026294690.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC128078580 Neighboring gene thioredoxin reductase 3 Neighboring gene transmembrane protein 43 Neighboring gene uncharacterized LOC128078579 Neighboring gene solute carrier family 41 member 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026294690 Unplaced Scaffold Reference pur_lepc_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 13

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_026119805.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference pur_lepc_1.0

Genomic

  1. NW_026294690.1 Reference pur_lepc_1.0

    Range
    10159448..10210955
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_052678927.1 → XP_052534887.1  carbohydrate sulfotransferase 13 isoform X3

  2. XM_052678926.1 → XP_052534886.1  carbohydrate sulfotransferase 13 isoform X2

  3. XM_052678923.1 → XP_052534883.1  carbohydrate sulfotransferase 13 isoform X1

  4. XM_052678925.1 → XP_052534885.1  carbohydrate sulfotransferase 13 isoform X1

  5. XM_052678928.1 → XP_052534888.1  carbohydrate sulfotransferase 13 isoform X3

RNA

  1. XR_008205700.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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