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EOGT EGF domain specific O-linked N-acetylglucosamine transferase [ Tympanuchus pallidicinctus (lesser prairie-chicken) ]

Gene ID: 128078279, updated on 25-Mar-2024

Summary

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Gene symbol
EOGT
Gene description
EGF domain specific O-linked N-acetylglucosamine transferase
Gene type
protein coding
RefSeq status
MODEL
Organism
Tympanuchus pallidicinctus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Tetraoninae; Tympanuchus
Orthologs
human mouse all
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Genomic context

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See EOGT in Genome Data Viewer
Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2023_02 current pur_lepc_1.0 (GCF_026119805.1) Unplaced Scaffold NW_026294690.1 (14991413..15007514, complement)

NW_026294690.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC128078420 Neighboring gene TAFA chemokine like family member 4 Neighboring gene TATA element modulatory factor 1 Neighboring gene ubiquitin like modifier activating enzyme 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026294690 Unplaced Scaffold Reference pur_lepc_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-GlcNAcylation via threonine IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum lumen IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
EGF domain-specific O-linked N-acetylglucosamine transferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_026119805.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference pur_lepc_1.0

Genomic

  1. NW_026294690.1 Reference pur_lepc_1.0

    Range
    14991413..15007514 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_052678300.1 → XP_052534260.1  EGF domain-specific O-linked N-acetylglucosamine transferase

  2. XM_052678299.1 → XP_052534259.1  EGF domain-specific O-linked N-acetylglucosamine transferase

Nucleotide Protein
Heading Accession and Version

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