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SEMA7A semaphorin 7A (JohnMiltonHagen blood group) [ Tympanuchus pallidicinctus (lesser prairie-chicken) ]

Gene ID: 128075178, updated on 25-Mar-2024

Summary

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Gene symbol
SEMA7A
Gene description
semaphorin 7A (JohnMiltonHagen blood group)
Gene type
protein coding
RefSeq status
MODEL
Organism
Tympanuchus pallidicinctus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Tetraoninae; Tympanuchus
Orthologs
human mouse all
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Genomic context

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See SEMA7A in Genome Data Viewer
Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
RS_2023_02 current pur_lepc_1.0 (GCF_026119805.1) Unplaced Scaffold NW_026294637.1 (17816616..17846648, complement)

NW_026294637.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC128075182 Neighboring gene cholesterol side-chain cleavage enzyme, mitochondrial Neighboring gene coiled-coil domain containing 33 Neighboring gene ubiquitin like 7 Neighboring gene actin, cytoplasmic type 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026294637 Unplaced Scaffold Reference pur_lepc_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chemorepellent activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables integrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables semaphorin receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in integrin-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative chemotaxis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of axon extension involved in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neural crest cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of ERK1 and ERK2 cascade IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of axon extension IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of macrophage cytokine production IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of inflammatory response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in semaphorin-plexin signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
semaphorin-7A
Names
semaphorin 7A (John Milton Hagen blood group)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_026119805.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference pur_lepc_1.0

Genomic

  1. NW_026294637.1 Reference pur_lepc_1.0

    Range
    17816616..17846648 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_052671687.1 → XP_052527647.1  semaphorin-7A isoform X3

  2. XM_052671690.1 → XP_052527650.1  semaphorin-7A isoform X6

  3. XM_052671689.1 → XP_052527649.1  semaphorin-7A isoform X5

  4. XM_052671685.1 → XP_052527645.1  semaphorin-7A isoform X1

  5. XM_052671686.1 → XP_052527646.1  semaphorin-7A isoform X2

  6. XM_052671688.1 → XP_052527648.1  semaphorin-7A isoform X4

Nucleotide Protein
Heading Accession and Version

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