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TMTC3 transmembrane O-mannosyltransferase targeting cadherins 3 [ Tympanuchus pallidicinctus (lesser prairie-chicken) ]

Gene ID: 128073505, updated on 25-Mar-2024

Summary

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Gene symbol
TMTC3
Gene description
transmembrane O-mannosyltransferase targeting cadherins 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Tympanuchus pallidicinctus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Tetraoninae; Tympanuchus
Orthologs
human mouse all
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Genomic context

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See TMTC3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2023_02 current pur_lepc_1.0 (GCF_026119805.1) Unplaced Scaffold NW_026294802.1 (21497742..21534808, complement)

NW_026294802.1Genomic Context describing neighboring genes Neighboring gene KIT ligand Neighboring gene uncharacterized LOC128073521 Neighboring gene uncharacterized LOC128073516 Neighboring gene centrosomal protein 290 Neighboring gene chromosome unknown C12orf50 homolog Neighboring gene RNA 5'-phosphate and 3'-OH ligase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026294802 Unplaced Scaffold Reference pur_lepc_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein O-mannosyl-transferase TMTC3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_026119805.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference pur_lepc_1.0

Genomic

  1. NW_026294802.1 Reference pur_lepc_1.0

    Range
    21497742..21534808 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_052668540.1 → XP_052524500.1  protein O-mannosyl-transferase TMTC3 isoform X2

  2. XM_052668535.1 → XP_052524495.1  protein O-mannosyl-transferase TMTC3 isoform X1

  3. XM_052668536.1 → XP_052524496.1  protein O-mannosyl-transferase TMTC3 isoform X1

  4. XM_052668537.1 → XP_052524497.1  protein O-mannosyl-transferase TMTC3 isoform X1

  5. XM_052668539.1 → XP_052524499.1  protein O-mannosyl-transferase TMTC3 isoform X1

Nucleotide Protein
Heading Accession and Version

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