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PLEC plectin [ Budorcas taxicolor (takin) ]

Gene ID: 128059566, updated on 25-Mar-2024

Summary

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Gene symbol
PLEC
Gene description
plectin
Gene type
protein coding
RefSeq status
MODEL
Organism
Budorcas taxicolor
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Budorcas
Orthologs
human mouse all
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Genomic context

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See PLEC in Genome Data Viewer
Location:
chromosome: 14
Exon count:
36
Annotation release Status Assembly Chr Location
RS_2023_02 current Takin1.1 (GCF_023091745.1) 14 NC_068923.1 (14309584..14362133)

Chromosome 14 - NC_068923.1Genomic Context describing neighboring genes Neighboring gene glutamate ionotropic receptor NMDA type subunit associated protein 1 Neighboring gene poly(ADP-ribose) polymerase family member 10 Neighboring gene epiplakin 1 Neighboring gene nuclear receptor binding protein 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_068923.1 Chromosome 14 Reference Takin1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables keratin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural molecule activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intermediate filament bundle assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in wound healing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in keratin filament IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
plectin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_023091745.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Takin1.1 Primary Assembly

Genomic

  1. NC_068923.1 Reference Takin1.1 Primary Assembly

    Range
    14309584..14362133
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_052651983.1 → XP_052507943.1  plectin isoform X1

  2. XM_052651984.1 → XP_052507944.1  plectin isoform X2

  3. XM_052651987.1 → XP_052507947.1  plectin isoform X5

  4. XM_052651988.1 → XP_052507948.1  plectin isoform X6

  5. XM_052651989.1 → XP_052507949.1  plectin isoform X7

  6. XM_052651990.1 → XP_052507950.1  plectin isoform X8

  7. XM_052651985.1 → XP_052507945.1  plectin isoform X3

  8. XM_052651986.1 → XP_052507946.1  plectin isoform X4

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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