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ASPH aspartate beta-hydroxylase [ Budorcas taxicolor (takin) ]

Gene ID: 128059420, updated on 25-Mar-2024

Summary

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Gene symbol
ASPH
Gene description
aspartate beta-hydroxylase
Gene type
protein coding
RefSeq status
MODEL
Organism
Budorcas taxicolor
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Budorcas
Orthologs
human mouse all
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Genomic context

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See ASPH in Genome Data Viewer
Location:
chromosome: 14
Exon count:
25
Annotation release Status Assembly Chr Location
RS_2023_02 current Takin1.1 (GCF_023091745.1) 14 NC_068923.1 (40345906..40531888, complement)

Chromosome 14 - NC_068923.1Genomic Context describing neighboring genes Neighboring gene spindle and kinetochore-associated protein 3-like Neighboring gene clavesin 1 Neighboring gene sodium/potassium transporting ATPase interacting 3 Neighboring gene protein FAM220A-like Neighboring gene small nucleolar RNA SNORA70

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_068923.1 Chromosome 14 Reference Takin1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptidyl-aspartic acid 3-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptidyl-aspartic acid hydroxylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
aspartyl/asparaginyl beta-hydroxylase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_023091745.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Takin1.1 Primary Assembly

Genomic

  1. NC_068923.1 Reference Takin1.1 Primary Assembly

    Range
    40345906..40531888 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_052651843.1 → XP_052507803.1  aspartyl/asparaginyl beta-hydroxylase

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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