U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CAPN3 calpain 3 [ Budorcas taxicolor (takin) ]

Gene ID: 128053913, updated on 25-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
CAPN3
Gene description
calpain 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Budorcas taxicolor
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Budorcas
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See CAPN3 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
24
Annotation release Status Assembly Chr Location
RS_2023_02 current Takin1.1 (GCF_023091745.1) 10 NC_068919.1 (36211937..36267967)

Chromosome 10 - NC_068919.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 87A Neighboring gene glucosidase alpha, neutral C Neighboring gene zinc finger protein 106 Neighboring gene synaptosome associated protein 23

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_068919.1 Chromosome 10 Reference Takin1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium-dependent cysteine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
calpain-3

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_023091745.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Takin1.1 Primary Assembly

Genomic

  1. NC_068919.1 Reference Takin1.1 Primary Assembly

    Range
    36211937..36267967
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_052646409.1 → XP_052502369.1  calpain-3 isoform X1

  2. XM_052646410.1 → XP_052502370.1  calpain-3 isoform X2

  3. XM_052646411.1 → XP_052502371.1  calpain-3 isoform X3

  4. XM_052646412.1 → XP_052502372.1  calpain-3 isoform X4

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.