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LOC128052706 interferon alpha-2-like [ Budorcas taxicolor (takin) ]

Gene ID: 128052706, updated on 9-Nov-2023

Summary

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Gene symbol
LOC128052706
Gene description
interferon alpha-2-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Budorcas taxicolor
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Budorcas
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Genomic context

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See LOC128052706 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_02 current Takin1.1 (GCF_023091745.1) 8 NC_068917.1 (26475989..26477705)

Chromosome 8 - NC_068917.1Genomic Context describing neighboring genes Neighboring gene interferon omega-1-like Neighboring gene interferon beta-2-like Neighboring gene interferon beta-2-like Neighboring gene interferon alpha-2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_068917.1 Chromosome 8 Reference Takin1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cytokine activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables type I interferon receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in B cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in B cell proliferation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in T cell activation involved in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in adaptive immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cytokine-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in defense response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in humoral immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in natural killer cell activation involved in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of peptidyl-serine phosphorylation of STAT protein IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to exogenous dsRNA IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: interferon alpha-2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_023091745.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Takin1.1 Primary Assembly

Genomic

  1. NC_068917.1 Reference Takin1.1 Primary Assembly

    Range
    26475989..26477705
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_052645269.1 → XP_052501229.1  LOW QUALITY PROTEIN: interferon alpha-2-like

Nucleotide Protein
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