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LOC128009998 VIP36-like protein [ Carassius gibelio (silver crucian carp) ]

Gene ID: 128009998, updated on 19-Jun-2024

Summary

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Gene symbol
LOC128009998
Gene description
VIP36-like protein
See related
EnsemblRapid:ENSCGBG00020071165
Gene type
protein coding
RefSeq status
MODEL
Organism
Carassius gibelio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Carassius
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Genomic context

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See LOC128009998 in Genome Data Viewer
Location:
chromosome: A5
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_02 current carGib1.2-hapl.c (GCF_023724105.1) A5 NC_068375.1 (28730818..28735376)

Chromosome A5 - NC_068375.1Genomic Context describing neighboring genes Neighboring gene TM2 domain-containing protein 2 Neighboring gene T-box transcription factor TBX3 Neighboring gene leukocyte surface antigen CD53 Neighboring gene serine/threonine-protein kinase A-Raf

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_068375.1 Chromosome A5 Reference carGib1.2-hapl.c Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables D-mannose binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in COPII-coated ER to Golgi transport vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum-Golgi intermediate compartment IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
VIP36-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_023724105.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference carGib1.2-hapl.c Primary Assembly

Genomic

  1. NC_068375.1 Reference carGib1.2-hapl.c Primary Assembly

    Range
    28730818..28735376
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_052592985.1 → XP_052448945.1  VIP36-like protein

    Related
    ENSCGBP00020110439.1, ENSCGBT00020149579.1
Nucleotide Protein
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