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lncRNA:CR43494 long non-coding RNA:CR43494 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 12798101, updated on 11-Sep-2024

Summary

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Official Symbol
lncRNA:CR43494provided by FlyBase
Official Full Name
long non-coding RNA:CR43494provided by FlyBase
Primary source
FLYBASE:FBgn0263505
Locus tag
Dmel_CR43494
See related
AllianceGenome:FB:FBgn0263505
Gene type
ncRNA
RNA name
lncRNA
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CR43494; Dmel\CR43494
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Genomic context

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See lncRNA:CR43494 in Genome Data Viewer
Location:
3B4-3B4; 1-1.5 cM
Exon count:
1
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (2750919..2751416, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (2644952..2645449, complement)

Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene kin of irre Neighboring gene Syntaxin 4 Neighboring gene cramped Neighboring gene uncharacterized protein Neighboring gene white

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster. Liu X, et al. RNA, 2017 Dec. PMID 28851752, Free PMC Article
  2. The many landscapes of recombination in Drosophila melanogaster. Comeron JM, et al. PLoS Genet, 2012. PMID 23071443, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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  • lncRNA:CR43494-RA; Dmel\lncRNA:CR43494-RA; CR43494-RA; Dmel\CR43494-RA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004354.4 Reference assembly

    Range
    2750919..2751416 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. NR_047747.1 RNA Sequence

    Status: REVIEWED

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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