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capn3a calpain 3a, (p94) [ Carassius gibelio (silver crucian carp) ]

Gene ID: 127976709, updated on 28-May-2024

Summary

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Gene symbol
capn3a
Gene description
calpain 3a, (p94)
See related
EnsemblRapid:ENSCGBG00020005098
Gene type
protein coding
RefSeq status
MODEL
Organism
Carassius gibelio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Carassius
Orthologs
human zebrafish all
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Genomic context

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See capn3a in Genome Data Viewer
Location:
chromosome: B17
Exon count:
21
Annotation release Status Assembly Chr Location
RS_2023_02 current carGib1.2-hapl.c (GCF_023724105.1) B17 NC_068412.1 (9330687..9356276)

Chromosome B17 - NC_068412.1Genomic Context describing neighboring genes Neighboring gene tau tubulin kinase 2a Neighboring gene glucosidase, alpha; neutral C Neighboring gene zinc finger protein 106 Neighboring gene proton-activated chloride channel-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_068412.1 Chromosome B17 Reference carGib1.2-hapl.c Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium-dependent cysteine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
calpain-3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_023724105.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference carGib1.2-hapl.c Primary Assembly

Genomic

  1. NC_068412.1 Reference carGib1.2-hapl.c Primary Assembly

    Range
    9330687..9356276
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_052581314.1 → XP_052437274.1  calpain-3

    Related
    ENSCGBP00020011621.1, ENSCGBT00020012394.1
Nucleotide Protein
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