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galnt17 polypeptide N-acetylgalactosaminyltransferase 17 [ Carassius gibelio (silver crucian carp) ]

Gene ID: 127972122, updated on 12-Sep-2024

Summary

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Gene symbol
galnt17
Gene description
polypeptide N-acetylgalactosaminyltransferase 17
See related
EnsemblRapid:ENSCGBG00020074789
Gene type
protein coding
RefSeq status
MODEL
Organism
Carassius gibelio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Carassius
Orthologs
zebrafish all
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Genomic context

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See galnt17 in Genome Data Viewer
Location:
chromosome: B15
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_02 current carGib1.2-hapl.c (GCF_023724105.1) B15 NC_068410.1 (16571190..16583146, complement)

Chromosome B15 - NC_068410.1Genomic Context describing neighboring genes Neighboring gene tRNA-yW synthesizing protein 1 homolog (S. cerevisiae) Neighboring gene calneuron 1 Neighboring gene flotillin 2b Neighboring gene family with sequence similarity 222 member Bb

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_068410.1 Chromosome B15 Reference carGib1.2-hapl.c Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 17

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_023724105.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference carGib1.2-hapl.c Primary Assembly

Genomic

  1. NC_068410.1 Reference carGib1.2-hapl.c Primary Assembly

    Range
    16571190..16583146 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_052575432.1 → XP_052431392.1  polypeptide N-acetylgalactosaminyltransferase 17

    Related
    ENSCGBP00020116215.1, ENSCGBT00020157838.1
Nucleotide Protein
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