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LOC127962217 kin of IRRE-like protein 1 [ Carassius gibelio (silver crucian carp) ]

Gene ID: 127962217, updated on 28-May-2024

Summary

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Gene symbol
LOC127962217
Gene description
kin of IRRE-like protein 1
See related
EnsemblRapid:ENSCGBG00020022808
Gene type
protein coding
RefSeq status
MODEL
Organism
Carassius gibelio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Carassius
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Genomic context

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See LOC127962217 in Genome Data Viewer
Location:
chromosome: B7
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2023_02 current carGib1.2-hapl.c (GCF_023724105.1) B7 NC_068402.1 (6136853..6166161)

Chromosome B7 - NC_068402.1Genomic Context describing neighboring genes Neighboring gene dedicator of cytokinesis 11 Neighboring gene uncharacterized LOC127962552 Neighboring gene NADH:ubiquinone oxidoreductase core subunit S2 Neighboring gene high affinity immunoglobulin epsilon receptor subunit gamma

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_068402.1 Chromosome B7 Reference carGib1.2-hapl.c Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
kin of IRRE-like protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_023724105.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference carGib1.2-hapl.c Primary Assembly

Genomic

  1. NC_068402.1 Reference carGib1.2-hapl.c Primary Assembly

    Range
    6136853..6166161
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_052561724.1 → XP_052417684.1  kin of IRRE-like protein 1 isoform X2

    Related
    ENSCGBP00020019935.1, ENSCGBT00020041810.1

  2. XM_052561723.1 → XP_052417683.1  kin of IRRE-like protein 1 isoform X1

    Related
    ENSCGBP00020019947.1, ENSCGBT00020041836.1
Nucleotide Protein
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