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LOC127959411 TGF-beta-activated kinase 1 and MAP3K7-binding protein 1-like [ Carassius gibelio (silver crucian carp) ]

Gene ID: 127959411, updated on 28-May-2024

Summary

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Gene symbol
LOC127959411
Gene description
TGF-beta-activated kinase 1 and MAP3K7-binding protein 1-like
See related
EnsemblRapid:ENSCGBG00020082770
Gene type
protein coding
RefSeq status
MODEL
Organism
Carassius gibelio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Carassius
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Genomic context

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See LOC127959411 in Genome Data Viewer
Location:
chromosome: B6
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_02 current carGib1.2-hapl.c (GCF_023724105.1) B6 NC_068401.1 (29502432..29510295)

Chromosome B6 - NC_068401.1Genomic Context describing neighboring genes Neighboring gene voltage-dependent calcium channel gamma-2 subunit-like Neighboring gene intraflagellar transport 27 homolog (Chlamydomonas) Neighboring gene beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase-like Neighboring gene C1q and TNF related 6b

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_068401.1 Chromosome B6 Reference carGib1.2-hapl.c Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein serine/threonine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
TGF-beta-activated kinase 1 and MAP3K7-binding protein 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_023724105.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference carGib1.2-hapl.c Primary Assembly

Genomic

  1. NC_068401.1 Reference carGib1.2-hapl.c Primary Assembly

    Range
    29502432..29510295
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_052558588.1 → XP_052414548.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 1-like isoform X1

    Related
    ENSCGBP00020130797.1, ENSCGBT00020177801.1

  2. XM_052558589.1 → XP_052414549.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 1-like isoform X2

    Related
    ENSCGBP00020130793.1, ENSCGBT00020177797.1
Nucleotide Protein
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