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LOC127958020 secreted frizzled-related protein 1 [ Carassius gibelio (silver crucian carp) ]

Gene ID: 127958020, updated on 28-May-2024

Summary

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Gene symbol
LOC127958020
Gene description
secreted frizzled-related protein 1
See related
EnsemblRapid:ENSCGBG00020082009
Gene type
protein coding
RefSeq status
MODEL
Organism
Carassius gibelio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Carassius
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Genomic context

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See LOC127958020 in Genome Data Viewer
Location:
chromosome: B5
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_02 current carGib1.2-hapl.c (GCF_023724105.1) B5 NC_068400.1 (36659328..36669125, complement)

Chromosome B5 - NC_068400.1Genomic Context describing neighboring genes Neighboring gene zinc finger matrin-type protein 4-like Neighboring gene uncharacterized LOC127958024 Neighboring gene uncharacterized LOC127958029 Neighboring gene lysyl oxidase homolog 2B Neighboring gene uncharacterized LOC127958028 Neighboring gene dopamine receptor D7

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_068400.1 Chromosome B5 Reference carGib1.2-hapl.c Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables Wnt-protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in non-canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
secreted frizzled-related protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_023724105.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference carGib1.2-hapl.c Primary Assembly

Genomic

  1. NC_068400.1 Reference carGib1.2-hapl.c Primary Assembly

    Range
    36659328..36669125 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_052556802.1 → XP_052412762.1  secreted frizzled-related protein 1

    Related
    ENSCGBP00020129072.1, ENSCGBT00020175658.1
Nucleotide Protein
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