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AgaP_AGAP010078 AGAP010078-PA [ Anopheles gambiae str. PEST ]

Gene ID: 1279509, discontinued on 25-Dec-2023

Summary

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Gene symbol
AgaP_AGAP010078
Gene description
AGAP010078-PA
Locus tag
AgaP_AGAP010078
See related
VectorBase:AGAP010078
Gene type
protein coding
RNA name
AGAP010078-RA
RefSeq status
PROVISIONAL
Organism
Anopheles gambiae str. PEST (strain: PEST)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
Old locus tag
AgaP_ENSANGG00000004641; ENSANGG00000004641
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Genomic context

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See AgaP_AGAP010078 in Genome Data Viewer
Location:
chromosome: 3R
Exon count:
1
Sequence:
Chromosome: 3R; NT_078268.4 (48656887..48658401, complement)

Genomic regions, transcripts, and products

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Genomic Sequence:
NT_078268.4

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Anopheles gambiae genome: an update. Mongin E, et al. Trends Parasitol, 2004 Feb. PMID 14747013
  2. The genome sequence of the malaria mosquito Anopheles gambiae. Holt RA, et al. Science, 2002 Oct 4. PMID 12364791

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
AGAP010078-PA
XP_319236.4
  • AGAP010078-PA encoded by AGAP010078-RA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_078268.4 Reference assembly

    Range
    48656887..48658401 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_319236.4 → XP_319236.4  AGAP010078-PA, partial [Anopheles gambiae str. PEST]

    Status: PROVISIONAL

    Conserved Domains (3) summary
    cd02510
    Location:72 → 368
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    cd00161
    Location:387 → 498
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    pfam00652
    Location:387 → 497
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
Nucleotide Protein
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Gene LinkOut

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Molecular Biology Databases
Research Materials