U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

si:dkey-121b10.7 heparan sulfate glucosamine 3-O-sulfotransferase 6 [ Carassius gibelio (silver crucian carp) ]

Gene ID: 127949051, updated on 28-May-2024

Summary

Go to the top of the page Help
Gene symbol
si:dkey-121b10.7
Gene description
heparan sulfate glucosamine 3-O-sulfotransferase 6
See related
EnsemblRapid:ENSCGBG00020003618
Gene type
protein coding
RefSeq status
MODEL
Organism
Carassius gibelio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Carassius
Orthologs
zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See si:dkey-121b10.7 in Genome Data Viewer
Location:
chromosome: B1
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_02 current carGib1.2-hapl.c (GCF_023724105.1) B1 NC_068396.1 (30539648..30555273, complement)

Chromosome B1 - NC_068396.1Genomic Context describing neighboring genes Neighboring gene phospholipase D family, member 6 Neighboring gene calponin 1, basic, smooth muscle, a Neighboring gene mucin-2 Neighboring gene uncharacterized LOC127949052

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_068396.1 Chromosome B1 Reference carGib1.2-hapl.c Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
heparan sulfate glucosamine 3-O-sulfotransferase 6

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_023724105.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference carGib1.2-hapl.c Primary Assembly

Genomic

  1. NC_068396.1 Reference carGib1.2-hapl.c Primary Assembly

    Range
    30539648..30555273 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_052545982.1 → XP_052401942.1  heparan sulfate glucosamine 3-O-sulfotransferase 6

    Related
    ENSCGBP00020008153.1, ENSCGBT00020008664.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases