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LOC127946067 receptor-type tyrosine-protein phosphatase mu [ Carassius gibelio (silver crucian carp) ]

Gene ID: 127946067, updated on 28-May-2024

Summary

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Gene symbol
LOC127946067
Gene description
receptor-type tyrosine-protein phosphatase mu
See related
EnsemblRapid:ENSCGBG00020052554
Gene type
protein coding
RefSeq status
MODEL
Organism
Carassius gibelio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Carassius
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Genomic context

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See LOC127946067 in Genome Data Viewer
Location:
chromosome: A24
Exon count:
34
Annotation release Status Assembly Chr Location
RS_2023_02 current carGib1.2-hapl.c (GCF_023724105.1) A24 NC_068394.1 (573391..734668)

Chromosome A24 - NC_068394.1Genomic Context describing neighboring genes Neighboring gene rho GTPase-activating protein 18 Neighboring gene laminin, alpha 1 Neighboring gene GTP-binding protein Rheb Neighboring gene gamma-crystallin N-B-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_068394.1 Chromosome A24 Reference carGib1.2-hapl.c Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein tyrosine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
receptor-type tyrosine-protein phosphatase mu

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_023724105.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference carGib1.2-hapl.c Primary Assembly

Genomic

  1. NC_068394.1 Reference carGib1.2-hapl.c Primary Assembly

    Range
    573391..734668
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_052542364.1 → XP_052398324.1  receptor-type tyrosine-protein phosphatase mu isoform X8

  2. XM_052542358.1 → XP_052398318.1  receptor-type tyrosine-protein phosphatase mu isoform X2

    Related
    ENSCGBP00020076685.1, ENSCGBT00020108994.1

  3. XM_052542366.1 → XP_052398326.1  receptor-type tyrosine-protein phosphatase mu isoform X9

    Related
    ENSCGBP00020076678.1, ENSCGBT00020108987.1

  4. XM_052542357.1 → XP_052398317.1  receptor-type tyrosine-protein phosphatase mu isoform X1

    Related
    ENSCGBP00020076683.1, ENSCGBT00020108992.1

  5. XM_052542359.1 → XP_052398319.1  receptor-type tyrosine-protein phosphatase mu isoform X3

    Related
    ENSCGBP00020076680.1, ENSCGBT00020108989.1

  6. XM_052542362.1 → XP_052398322.1  receptor-type tyrosine-protein phosphatase mu isoform X6

  7. XM_052542363.1 → XP_052398323.1  receptor-type tyrosine-protein phosphatase mu isoform X7

  8. XM_052542360.1 → XP_052398320.1  receptor-type tyrosine-protein phosphatase mu isoform X4

    Related
    ENSCGBP00020076682.1, ENSCGBT00020108991.1

  9. XM_052542361.1 → XP_052398321.1  receptor-type tyrosine-protein phosphatase mu isoform X5

Nucleotide Protein
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