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LOC127761671 F-box protein GID2 [ Oryza glaberrima (African rice) ]

Gene ID: 127761671, updated on 23-Nov-2023

Summary

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Gene symbol
LOC127761671
Gene description
F-box protein GID2
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza glaberrima
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Genomic context

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See LOC127761671 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
1
Annotation release Status Assembly Chr Location
100 current OglaRS2 (GCF_000147395.1) 2 NC_068327.1 (21962416..21963907)

Chromosome 2 - NC_068327.1Genomic Context describing neighboring genes Neighboring gene cell number regulator 2-like Neighboring gene uncharacterized LOC127763912 Neighboring gene 14-3-3-like protein GF14-E Neighboring gene non-specific lipid transfer protein GPI-anchored 7-like Neighboring gene uncharacterized LOC127761672 Neighboring gene prohibitin-3, mitochondrial-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_068327.1 Chromosome 2 Reference OglaRS2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in gibberellic acid mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of gibberellic acid mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SCF ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
F-box protein GID2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oryza glaberrima Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OglaRS2 Primary Assembly

Genomic

  1. NC_068327.1 Reference OglaRS2 Primary Assembly

    Range
    21962416..21963907
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_052285998.1 → XP_052141958.1  F-box protein GID2

    UniProtKB/TrEMBL
    I1P1L6
Nucleotide Protein
Heading Accession and Version

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