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LOC127709842 xylosyltransferase 1-like [ Mytilus californianus (California mussel) ]

Gene ID: 127709842, updated on 10-Apr-2024

Summary

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Gene symbol
LOC127709842
Gene description
xylosyltransferase 1-like
See related
EnsemblRapid:LOC127709842
Gene type
protein coding
RefSeq status
MODEL
Organism
Mytilus californianus
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia; Autobranchia; Pteriomorphia; Mytilida; Mytiloidea; Mytilidae; Mytilinae; Mytilus
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Genomic context

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See LOC127709842 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current xbMytCali1.0.p (GCF_021869535.1) Unplaced Scaffold NW_026262723.1 (80431314..80462081)

NW_026262723.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 180-like Neighboring gene transmembrane protein 180-like Neighboring gene uncharacterized LOC127709844 Neighboring gene UPF0489 protein C5orf22 homolog

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026262723 Unplaced Scaffold Reference xbMytCali1.0.p

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chondroitin sulfate proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heparan sulfate proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
xylosyltransferase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mytilus californianus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference xbMytCali1.0.p

Genomic

  1. NW_026262723.1 Reference xbMytCali1.0.p

    Range
    80431314..80462081
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_052215511.1 → XP_052071471.1  xylosyltransferase 1-like

    Related
    XP_052071471.1, XM_052215511.1
Nucleotide Protein
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