U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC127708623 beta-1,3-N-acetylglucosaminyltransferase radical fringe-like [ Mytilus californianus (California mussel) ]

Gene ID: 127708623, updated on 10-Apr-2024

Summary

Go to the top of the page Help
Gene symbol
LOC127708623
Gene description
beta-1,3-N-acetylglucosaminyltransferase radical fringe-like
See related
EnsemblRapid:LOC127708623
Gene type
protein coding
RefSeq status
MODEL
Organism
Mytilus californianus
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia; Autobranchia; Pteriomorphia; Mytilida; Mytiloidea; Mytilidae; Mytilinae; Mytilus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC127708623 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current xbMytCali1.0.p (GCF_021869535.1) Unplaced Scaffold NW_026262723.1 (67545161..67574614, complement)

NW_026262723.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC127708123 Neighboring gene uncharacterized LOC127708626 Neighboring gene syntaxin-8-like Neighboring gene perlucin-like protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_026262723 Unplaced Scaffold Reference xbMytCali1.0.p

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. A cohort of new adhesive proteins identified from transcriptomic analysis of mussel foot glands. DeMartini DG, et al. J R Soc Interface, 2017 Jun. PMID 28592662, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
beta-1,3-N-acetylglucosaminyltransferase radical fringe-like; fringe glycosyltransferase-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Mytilus californianus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference xbMytCali1.0.p

Genomic

  1. NW_026262723.1 Reference xbMytCali1.0.p

    Range
    67545161..67574614 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_052213649.1 → XP_052069609.1  beta-1,3-N-acetylglucosaminyltransferase radical fringe-like isoform X1

    Related
    XP_052069609.1, XM_052213649.1

  2. XM_052213650.1 → XP_052069610.1  fringe glycosyltransferase-like isoform X2

    Related
    XP_052069610.1, XM_052213650.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases