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PLCD1 phospholipase C delta 1 [ Antechinus flavipes (yellow-footed antechinus) ]

Gene ID: 127549721, updated on 24-Mar-2024

Summary

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Gene symbol
PLCD1
Gene description
phospholipase C delta 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Antechinus flavipes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Antechinus
Orthologs
human mouse all
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Genomic context

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See PLCD1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2023_02 current AdamAnt_v2 (GCF_016432865.1) 1 NC_067398.1 (3871158..3925201, complement)

Chromosome 1 - NC_067398.1Genomic Context describing neighboring genes Neighboring gene translation initiation factor IF-2-like Neighboring gene CTD small phosphatase like Neighboring gene villin like Neighboring gene DLEC1 cilia and flagella associated protein Neighboring gene acetyl-CoA acyltransferase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_067398.1 Chromosome 1 Reference AdamAnt_v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol phospholipase C activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphatidylinositol-mediated signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_016432865.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AdamAnt_v2 Primary Assembly

Genomic

  1. NC_067398.1 Reference AdamAnt_v2 Primary Assembly

    Range
    3871158..3925201 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051978000.1 → XP_051833960.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 isoform X2

  2. XM_051977992.1 → XP_051833952.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 isoform X1

Nucleotide Protein
Heading Accession and Version

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