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C1GALT1C1 C1GALT1 specific chaperone 1 [ Antechinus flavipes (yellow-footed antechinus) ]

Gene ID: 127543031, updated on 24-Mar-2024

Summary

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Gene symbol
C1GALT1C1
Gene description
C1GALT1 specific chaperone 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Antechinus flavipes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Antechinus
Orthologs
human mouse all
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Genomic context

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See C1GALT1C1 in Genome Data Viewer
Location:
chromosome: X
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_02 current AdamAnt_v2 (GCF_016432865.1) X NC_067404.1 (53590166..53634141)

Chromosome X - NC_067404.1Genomic Context describing neighboring genes Neighboring gene serine-rich adhesin for platelets-like Neighboring gene uncharacterized LOC127542728 Neighboring gene uncharacterized LOC127543033 Neighboring gene cullin 4B Neighboring gene lysosomal associated membrane protein 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_067404.1 Chromosome X Reference AdamAnt_v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in O-glycan processing, core 1 IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C1GALT1-specific chaperone 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_016432865.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AdamAnt_v2 Primary Assembly

Genomic

  1. NC_067404.1 Reference AdamAnt_v2 Primary Assembly

    Range
    53590166..53634141
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051968993.1 → XP_051824953.1  C1GALT1-specific chaperone 1

  2. XM_051968995.1 → XP_051824955.1  C1GALT1-specific chaperone 1

  3. XM_051968994.1 → XP_051824954.1  C1GALT1-specific chaperone 1

RNA

  1. XR_007949116.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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