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b3gnt5b UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5b [ Ctenopharyngodon idella (grass carp) ]

Gene ID: 127522518, updated on 2-May-2024

Summary

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Gene symbol
b3gnt5b
Gene description
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5b
Gene type
protein coding
RefSeq status
MODEL
Organism
Ctenopharyngodon idella
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Xenocyprididae; Xenocypridinae; Ctenopharyngodon
Orthologs
zebrafish all
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Genomic context

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See b3gnt5b in Genome Data Viewer
Location:
chromosome: 2
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_02 current HZGC01 (GCF_019924925.1) 2 NC_067221.1 (21925743..21932931, complement)

Chromosome 2 - NC_067221.1Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 4A2 Neighboring gene small nucleolar RNA SNORA81 Neighboring gene small nucleolar RNA SNORD2 Neighboring gene TBL1X/Y related 1b Neighboring gene potassium large conductance calcium-activated channel, subfamily M, beta member 2a

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_067221.1 Chromosome 2 Reference HZGC01 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in brain development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_019924925.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HZGC01 Primary Assembly

Genomic

  1. NC_067221.1 Reference HZGC01 Primary Assembly

    Range
    21925743..21932931 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051912592.1 → XP_051768552.1  lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase B

Nucleotide Protein
Heading Accession and Version

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