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sfrp1a secreted frizzled-related protein 1a [ Ctenopharyngodon idella (grass carp) ]

Gene ID: 127513376, updated on 24-Mar-2024

Summary

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Gene symbol
sfrp1a
Gene description
secreted frizzled-related protein 1a
Gene type
protein coding
RefSeq status
MODEL
Organism
Ctenopharyngodon idella
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Xenocyprididae; Xenocypridinae; Ctenopharyngodon
Orthologs
zebrafish all
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Genomic context

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See sfrp1a in Genome Data Viewer
Location:
chromosome: 5
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_02 current HZGC01 (GCF_019924925.1) 5 NC_067224.1 (28156300..28167456)

Chromosome 5 - NC_067224.1Genomic Context describing neighboring genes Neighboring gene lysyl oxidase-like 2b Neighboring gene uncharacterized LOC127512942 Neighboring gene zinc finger, matrin-type 4a Neighboring gene uncharacterized LOC127513160

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_067224.1 Chromosome 5 Reference HZGC01 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables Wnt-protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in non-canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
secreted frizzled-related protein 1a

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_019924925.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HZGC01 Primary Assembly

Genomic

  1. NC_067224.1 Reference HZGC01 Primary Assembly

    Range
    28156300..28167456
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051895092.1 → XP_051751052.1  secreted frizzled-related protein 1a isoform X2

  2. XM_051895090.1 → XP_051751050.1  secreted frizzled-related protein 1a isoform X1

  3. XM_051895091.1 → XP_051751051.1  secreted frizzled-related protein 1a isoform X1

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases