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LOC127507058 probable polypeptide N-acetylgalactosaminyltransferase 8 [ Ctenopharyngodon idella (grass carp) ]

Gene ID: 127507058, updated on 23-Nov-2023

Summary

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Gene symbol
LOC127507058
Gene description
probable polypeptide N-acetylgalactosaminyltransferase 8
Gene type
protein coding
RefSeq status
MODEL
Organism
Ctenopharyngodon idella
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Xenocyprididae; Xenocypridinae; Ctenopharyngodon
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Genomic context

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See LOC127507058 in Genome Data Viewer
Location:
chromosome: 24
Exon count:
57
Annotation release Status Assembly Chr Location
RS_2023_02 current HZGC01 (GCF_019924925.1) 24 NC_067243.1 (12571013..12700110)

Chromosome 24 - NC_067243.1Genomic Context describing neighboring genes Neighboring gene dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 4 Neighboring gene NADH:ubiquinone oxidoreductase subunit A9a Neighboring gene chromatin remodeling regulator CECR2 Neighboring gene adenosine deaminase 2a Neighboring gene uncharacterized LOC127507021

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_067243.1 Chromosome 24 Reference HZGC01 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RIB43A-like with coiled-coils protein 2; probable polypeptide N-acetylgalactosaminyltransferase 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_019924925.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HZGC01 Primary Assembly

Genomic

  1. NC_067243.1 Reference HZGC01 Primary Assembly

    Range
    12571013..12700110
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051883929.1 → XP_051739889.1  probable polypeptide N-acetylgalactosaminyltransferase 8 isoform X5

  2. XM_051883926.1 → XP_051739886.1  probable polypeptide N-acetylgalactosaminyltransferase 8 isoform X3

  3. XM_051883924.1 → XP_051739884.1  probable polypeptide N-acetylgalactosaminyltransferase 8 isoform X1

  4. XM_051883925.1 → XP_051739885.1  probable polypeptide N-acetylgalactosaminyltransferase 8 isoform X2

  5. XM_051883934.1 → XP_051739894.1  probable polypeptide N-acetylgalactosaminyltransferase 8 isoform X10

  6. XM_051883936.1 → XP_051739896.1  RIB43A-like with coiled-coils protein 2 isoform X12

  7. XM_051883935.1 → XP_051739895.1  probable polypeptide N-acetylgalactosaminyltransferase 8 isoform X11

  8. XM_051883931.1 → XP_051739891.1  probable polypeptide N-acetylgalactosaminyltransferase 8 isoform X7

  9. XM_051883933.1 → XP_051739893.1  probable polypeptide N-acetylgalactosaminyltransferase 8 isoform X9

  10. XM_051883930.1 → XP_051739890.1  probable polypeptide N-acetylgalactosaminyltransferase 8 isoform X6

  11. XM_051883932.1 → XP_051739892.1  probable polypeptide N-acetylgalactosaminyltransferase 8 isoform X8

  12. XM_051883928.1 → XP_051739888.1  probable polypeptide N-acetylgalactosaminyltransferase 8 isoform X4

RNA

  1. XR_007928224.1 RNA Sequence

Nucleotide Protein
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