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sgcd sarcoglycan, delta (dystrophin-associated glycoprotein) [ Ctenopharyngodon idella (grass carp) ]

Gene ID: 127504236, updated on 24-Mar-2024

Summary

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Gene symbol
sgcd
Gene description
sarcoglycan, delta (dystrophin-associated glycoprotein)
Gene type
protein coding
RefSeq status
MODEL
Organism
Ctenopharyngodon idella
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Xenocyprididae; Xenocypridinae; Ctenopharyngodon
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 21
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_02 current HZGC01 (GCF_019924925.1) 21 NC_067240.1 (23184344..23406145)

Chromosome 21 - NC_067240.1Genomic Context describing neighboring genes Neighboring gene gem (nuclear organelle) associated protein 5 Neighboring gene mitochondrial ribosomal protein L22 Neighboring gene rho GTPase-activating protein 7 Neighboring gene arginyl-tRNA synthetase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_067240.1 Chromosome 21 Reference HZGC01 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cardiac muscle tissue development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of sarcoglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
delta-sarcoglycan

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_019924925.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HZGC01 Primary Assembly

Genomic

  1. NC_067240.1 Reference HZGC01 Primary Assembly

    Range
    23184344..23406145
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051878783.1 → XP_051734743.1  delta-sarcoglycan isoform X2

  2. XM_051878784.1 → XP_051734744.1  delta-sarcoglycan isoform X2

  3. XM_051878780.1 → XP_051734740.1  delta-sarcoglycan isoform X1

  4. XM_051878782.1 → XP_051734742.1  delta-sarcoglycan isoform X2

Nucleotide Protein
Heading Accession and Version

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