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galnt16 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 16 [ Ctenopharyngodon idella (grass carp) ]

Gene ID: 127498912, updated on 24-Mar-2024

Summary

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Gene symbol
galnt16
Gene description
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 16
Gene type
protein coding
RefSeq status
MODEL
Organism
Ctenopharyngodon idella
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Xenocyprididae; Xenocypridinae; Ctenopharyngodon
Orthologs
human zebrafish all
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Genomic context

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See galnt16 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2023_02 current HZGC01 (GCF_019924925.1) 17 NC_067236.1 (29870717..29927405, complement)

Chromosome 17 - NC_067236.1Genomic Context describing neighboring genes Neighboring gene exonuclease 3'-5' domain containing 2 Neighboring gene NUMB endocytic adaptor protein Neighboring gene VPS39 subunit of HOPS complex Neighboring gene filamin-A-interacting protein 1 Neighboring gene cytochrome c oxidase subunit 7A2, mitochondrial Neighboring gene transmembrane protein 30Aa

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_067236.1 Chromosome 17 Reference HZGC01 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 16

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_019924925.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HZGC01 Primary Assembly

Genomic

  1. NC_067236.1 Reference HZGC01 Primary Assembly

    Range
    29870717..29927405 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051868870.1 → XP_051724830.1  polypeptide N-acetylgalactosaminyltransferase 16

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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