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ogt.1 O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1 [ Ctenopharyngodon idella (grass carp) ]

Gene ID: 127494128, updated on 24-Mar-2024

Summary

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Gene symbol
ogt.1
Gene description
O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Ctenopharyngodon idella
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Xenocyprididae; Xenocypridinae; Ctenopharyngodon
Orthologs
zebrafish all
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Genomic context

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See ogt.1 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
22
Annotation release Status Assembly Chr Location
RS_2023_02 current HZGC01 (GCF_019924925.1) 14 NC_067233.1 (1916110..1934662)

Chromosome 14 - NC_067233.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC127494139 Neighboring gene small nucleolar RNA SNORA74 Neighboring gene FH2 domain containing 2 Neighboring gene uncharacterized LOC127494140 Neighboring gene polyamine modulated factor 1 Neighboring gene thioredoxin-related transmembrane protein 2a

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_067233.1 Chromosome 14 Reference HZGC01 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_019924925.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HZGC01 Primary Assembly

Genomic

  1. NC_067233.1 Reference HZGC01 Primary Assembly

    Range
    1916110..1934662
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051859762.1 → XP_051715722.1  LOW QUALITY PROTEIN: UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit

Nucleotide Protein
Heading Accession and Version

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