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LOC127454638 dysferlin-like [ Myxocyprinus asiaticus (Chinese sucker) ]

Gene ID: 127454638, updated on 10-Apr-2024

Summary

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Gene symbol
LOC127454638
Gene description
dysferlin-like
See related
EnsemblRapid:ENSMTCG00000010331
Gene type
protein coding
RefSeq status
MODEL
Organism
Myxocyprinus asiaticus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Catostomoidei; Catostomidae; Myxocyprinus
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Genomic context

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See LOC127454638 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
56
Annotation release Status Assembly Chr Location
RS_2023_02 current UBuf_Myxa_2 (GCF_019703515.2) 1 NC_059344.1 (23446977..23586493, complement)

Chromosome 1 - NC_059344.1Genomic Context describing neighboring genes Neighboring gene exocyst complex component 6B Neighboring gene cytochrome P450 26B1 Neighboring gene mastermind-like domain-containing protein 1 Neighboring gene myotubularin 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_059344.1 Chromosome 1 Reference UBuf_Myxa_2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium-dependent phospholipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in T-tubule organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in macrophage activation involved in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in monocyte activation involved in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of phagocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plasma membrane repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle fusion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in T-tubule IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasmic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dysferlin-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_019703515.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UBuf_Myxa_2 Primary Assembly

Genomic

  1. NC_059344.1 Reference UBuf_Myxa_2 Primary Assembly

    Range
    23446977..23586493 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051722074.1 → XP_051578034.1  dysferlin-like isoform X2

    Related
    ENSMTCP00000024297.1, ENSMTCT00000025058.1

  2. XM_051722152.1 → XP_051578112.1  dysferlin-like isoform X3

  3. XM_051722023.1 → XP_051577983.1  dysferlin-like isoform X1

    Related
    ENSMTCP00000024295.1, ENSMTCT00000025056.1
Nucleotide Protein
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Gene LinkOut

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Molecular Biology Databases