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LOC127453454 alkylated DNA repair protein alkB homolog 8-like [ Myxocyprinus asiaticus (Chinese sucker) ]

Gene ID: 127453454, updated on 10-Apr-2024

Summary

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Gene symbol
LOC127453454
Gene description
alkylated DNA repair protein alkB homolog 8-like
See related
EnsemblRapid:ENSMTCG00000031691
Gene type
protein coding
RefSeq status
MODEL
Organism
Myxocyprinus asiaticus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Catostomoidei; Catostomidae; Myxocyprinus
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Genomic context

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See LOC127453454 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_02 current UBuf_Myxa_2 (GCF_019703515.2) 15 NC_059358.1 (9415715..9431738)

Chromosome 15 - NC_059358.1Genomic Context describing neighboring genes Neighboring gene G protein-activated inward rectifier potassium channel 2-like Neighboring gene rRNA 2'-O-methyltransferase fibrillarin-like Neighboring gene dual specificity tyrosine-phosphorylation-regulated kinase 1B-like Neighboring gene uncharacterized LOC127453459

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_059358.1 Chromosome 15 Reference UBuf_Myxa_2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 2-oxoglutarate-dependent dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables S-adenosylmethionine-dependent methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tRNA wobble uridine modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alkylated DNA repair protein alkB homolog 8-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_019703515.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UBuf_Myxa_2 Primary Assembly

Genomic

  1. NC_059358.1 Reference UBuf_Myxa_2 Primary Assembly

    Range
    9415715..9431738
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051719807.1 → XP_051575767.1  alkylated DNA repair protein alkB homolog 8-like

    Related
    ENSMTCP00000065859.1, ENSMTCT00000069078.1
Nucleotide Protein
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Gene LinkOut

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