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tlr2 toll-like receptor 2 [ Myxocyprinus asiaticus (Chinese sucker) ]

Gene ID: 127443498, updated on 24-Mar-2024

Summary

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Gene symbol
tlr2
Gene description
toll-like receptor 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Myxocyprinus asiaticus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Catostomoidei; Catostomidae; Myxocyprinus
Orthologs
human zebrafish all
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Genomic context

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See tlr2 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_02 current UBuf_Myxa_2 (GCF_019703515.2) 7 NC_059350.1 (46368572..46373050, complement)

Chromosome 7 - NC_059350.1Genomic Context describing neighboring genes Neighboring gene calcium channel, voltage-dependent, gamma subunit 3a Neighboring gene protein kinase C, beta a Neighboring gene suppressor of cytokine signaling 1b Neighboring gene glutamate receptor, ionotropic, N-methyl D-aspartate 2A, b

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_059350.1 Chromosome 7 Reference UBuf_Myxa_2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmembrane signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables triacyl lipopeptide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in inflammatory response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in toll-like receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: toll-like receptor 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_019703515.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UBuf_Myxa_2 Primary Assembly

Genomic

  1. NC_059350.1 Reference UBuf_Myxa_2 Primary Assembly

    Range
    46368572..46373050 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051702177.1 → XP_051558137.1  LOW QUALITY PROTEIN: toll-like receptor 2

Nucleotide Protein
Heading Accession and Version

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