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LOC127437503 tryptophan 5-hydroxylase 1 [ Myxocyprinus asiaticus (Chinese sucker) ]

Gene ID: 127437503, updated on 10-Apr-2024

Summary

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Gene symbol
LOC127437503
Gene description
tryptophan 5-hydroxylase 1
See related
EnsemblRapid:ENSMTCG00000041213
Gene type
protein coding
RefSeq status
MODEL
Organism
Myxocyprinus asiaticus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Catostomoidei; Catostomidae; Myxocyprinus
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Genomic context

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See LOC127437503 in Genome Data Viewer
Location:
chromosome: 48
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_02 current UBuf_Myxa_2 (GCF_019703515.2) 48 NC_059391.1 (24147271..24155802)

Chromosome 48 - NC_059391.1Genomic Context describing neighboring genes Neighboring gene mucin-2-like Neighboring gene protein saal1-like Neighboring gene potassium voltage-gated channel subfamily C member 1-like Neighboring gene uncharacterized LOC127437690

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_059391.1 Chromosome 48 Reference UBuf_Myxa_2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tryptophan 5-monooxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in aromatic amino acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in serotonin biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tryptophan 5-hydroxylase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_019703515.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UBuf_Myxa_2 Primary Assembly

Genomic

  1. NC_059391.1 Reference UBuf_Myxa_2 Primary Assembly

    Range
    24147271..24155802
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051692473.1 → XP_051548433.1  tryptophan 5-hydroxylase 1 isoform X1

    Related
    ENSMTCP00000083709.1, ENSMTCT00000089712.1

  2. XM_051692474.1 → XP_051548434.1  tryptophan 5-hydroxylase 1 isoform X2

    Related
    ENSMTCP00000083708.1, ENSMTCT00000089711.1
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases