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pyd zonula occludens-like protein polychaetoid [ Anopheles gambiae (African malaria mosquito) ]

Gene ID: 1274206, updated on 12-Oct-2024

Summary

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Gene symbol
pyd
Gene description
zonula occludens-like protein polychaetoid
See related
VectorBase:AGAMI1_000377
Gene type
protein coding
RefSeq status
MODEL
Organism
Anopheles gambiae
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
Also known as
AGAP003546
Orthologs
fruit fly all
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Genomic context

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See pyd in Genome Data Viewer
Location:
chromosome: 2
Exon count:
21
Annotation release Status Assembly Chr Location
RS_2023_12 current idAnoGambNW_F1_1 (GCF_943734735.2) 2 NC_064601.1 (38757639..38804628)

Chromosome 2 - NC_064601.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC11175468 Neighboring gene maternal effect protein oskar Neighboring gene MORN repeat-containing protein retinophilin Neighboring gene MMS19 nucleotide excision repair protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064601.1 Chromosome 2 Reference idAnoGambNW_F1_1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell junction organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in bicellular tight junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tight junction protein ZO-1; uncharacterized protein LOC1274206
Names
AGAP003546-PA
AGAP003546-PB
AGAP003546-PC

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_943734735.2-RS_2023_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference idAnoGambNW_F1_1 Primary Assembly

Genomic

  1. NC_064601.1 Reference idAnoGambNW_F1_1 Primary Assembly

    Range
    38757639..38804628
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_061641676.1 → XP_061497660.1  uncharacterized protein LOC1274206 isoform X7

  2. XM_061641669.1 → XP_061497653.1  uncharacterized protein LOC1274206 isoform X1

  3. XM_061641671.1 → XP_061497655.1  uncharacterized protein LOC1274206 isoform X3

  4. XM_061641673.1 → XP_061497657.1  uncharacterized protein LOC1274206 isoform X5

  5. XM_061641670.1 → XP_061497654.1  uncharacterized protein LOC1274206 isoform X2

  6. XM_061641672.1 → XP_061497656.1  uncharacterized protein LOC1274206 isoform X4

  7. XM_061641674.1 → XP_061497658.1  uncharacterized protein LOC1274206 isoform X6

  8. XM_061641675.1 → XP_061497659.1  uncharacterized protein LOC1274206 isoform X6

  9. XM_061641677.1 → XP_061497661.1  uncharacterized protein LOC1274206 isoform X8

  10. XM_061641678.1 → XP_061497662.1  tight junction protein ZO-1 isoform X9

  11. XM_061641679.1 → XP_061497663.1  tight junction protein ZO-1 isoform X9

  12. XM_061641680.1 → XP_061497664.1  tight junction protein ZO-1 isoform X9

Nucleotide Protein Strain
Heading Accession and Version

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