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LOC127413050 kin of IRRE-like protein 1 [ Myxocyprinus asiaticus (Chinese sucker) ]

Gene ID: 127413050, updated on 10-Apr-2024

Summary

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Gene symbol
LOC127413050
Gene description
kin of IRRE-like protein 1
See related
EnsemblRapid:ENSMTCG00000007234
Gene type
protein coding
RefSeq status
MODEL
Organism
Myxocyprinus asiaticus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Catostomoidei; Catostomidae; Myxocyprinus
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Genomic context

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See LOC127413050 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2023_02 current UBuf_Myxa_2 (GCF_019703515.2) 2 NC_059345.1 (19488707..19530002, complement)

Chromosome 2 - NC_059345.1Genomic Context describing neighboring genes Neighboring gene inner centromere protein-like Neighboring gene high affinity immunoglobulin epsilon receptor subunit gamma-like Neighboring gene NADH:ubiquinone oxidoreductase core subunit S2 Neighboring gene transfer RNA arginine (anticodon UCU) Neighboring gene interleukin-13 receptor subunit alpha-1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_059345.1 Chromosome 2 Reference UBuf_Myxa_2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
kin of IRRE-like protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_019703515.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UBuf_Myxa_2 Primary Assembly

Genomic

  1. NC_059345.1 Reference UBuf_Myxa_2 Primary Assembly

    Range
    19488707..19530002 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051649893.1 → XP_051505853.1  kin of IRRE-like protein 1 isoform X2

    Related
    ENSMTCP00000016654.1, ENSMTCT00000017193.1

  2. XM_051649886.1 → XP_051505846.1  kin of IRRE-like protein 1 isoform X1

    Related
    ENSMTCP00000016698.1, ENSMTCT00000017237.1
Nucleotide Protein
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