U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC127331575 sucrose synthase 4 [ Lolium perenne ]

Gene ID: 127331575, updated on 23-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC127331575
Gene description
sucrose synthase 4
Gene type
protein coding
RefSeq status
MODEL
Organism
Lolium perenne
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Poodae; Poeae; Poeae Chloroplast Group 2 (Poeae type); Loliodinae; Loliinae; Lolium
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC127331575 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
15
Annotation release Status Assembly Chr Location
100 current MPB_Lper_Kyuss_1697 (GCF_019359855.1) 2 NC_067245.1 (27529516..27535268, complement)

Chromosome 2 - NC_067245.1Genomic Context describing neighboring genes Neighboring gene E3 ubiquitin-protein ligase EL5-like Neighboring gene RING-H2 finger protein ATL80-like Neighboring gene uncharacterized LOC127331576 Neighboring gene putative GTP diphosphokinase RSH1, chloroplastic

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_067245.1 Chromosome 2 Reference MPB_Lper_Kyuss_1697

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. De novo assembly of the perennial ryegrass transcriptome using an RNA-Seq strategy. Farrell JD, et al. PLoS One, 2014. PMID 25126744, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sucrose synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in sucrose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
sucrose synthase 4
Names
putative sucrose synthase 2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Lolium perenne Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MPB_Lper_Kyuss_1697

Genomic

  1. NC_067245.1 Reference MPB_Lper_Kyuss_1697

    Range
    27529516..27535268 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051357748.1 → XP_051213708.1  sucrose synthase 4

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases